Product Description: ankyrin-repeat protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | possibly expressed | 0.01 | 0.99 |
Trophozoite | possibly expressed | 0.00 | 1.00 |
Schizont | expressed | 0.05 | 0.97 |
Gametocyte | expressed | 0.50 | 0.75 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1010500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.399 | MFS: -2.544 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJU0
"Best" AlphaFill ligand hit: COA (coenzyme a, Local RMSD=0.10) with 3Q9U (Global RMSD=1.91)
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_105922
Most Similar Human Ortholog: Q96KQ7
TM-align score: 0.88 | RMSD: 2.06
Seq Identity: 0.18 | Length: 166 / 169
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000181090 | euchromatic histone lysine methyltransferase 1 |
ENSG00000204371 | euchromatic histone lysine methyltransferase 2 |
ENSG00000206376 | euchromatic histone lysine methyltransferase 2 |
ENSG00000224143 | euchromatic histone lysine methyltransferase 2 |
ENSG00000227333 | euchromatic histone lysine methyltransferase 2 |
ENSG00000232045 | euchromatic histone lysine methyltransferase 2 |
ENSG00000236759 | euchromatic histone lysine methyltransferase 2 |
ENSG00000238134 | euchromatic histone lysine methyltransferase 2 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 3 | 5 | 8 | 9 |
disruptive | 0 | 11 | 4 | 23 |
missense | 0 | 11 | 4 | 22 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 19 | 11 | 11 |
disruptive | 2 | 25 | 18 | 51 |
missense | 2 | 18 | 14 | 32 |
PlasmoDB Total SNPs: 131
Non-coding: 127 | Synonymous: 2 | Nonsynonymous: 2 | Stop Codon: 0
Protein Length: 169 | Molecular Weight (kDa): 19.275
UniProt ID(s): Q8IJU0
PDB ID(s): None
Isoelectric Point: 9.35
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR002110 | Ankyrin repeat |
InterPro | IPR020683 | Ankyrin repeat-containing domain |
InterPro | IPR036770 | Ankyrin repeat-containing domain superfamily |
PFam | PF12796 | Ankyrin repeat-containing domain |
PFam | PF13606 | Ankyrin repeat |
Superfamily | SSF48403 | Ankyrin repeat-containing domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |