About Gene List

PF3D7_1010700

Genome location: Pf3D7_10_v3:422,698..424,573(+)

Genome classification: Core

Function and Localization

Product Description: dolichyl-phosphate-mannose--protein mannosyltransferase, putative

SignalP Peptide: MINNNLFVFFLLSFFLSKICTC

# Transmembrane Domains: 0

EC Numbers: 2.4.1.109 (Dolichyl-phosphate-mannose--protein mannosyltransferase)

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005634 nucleus

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 0.30 0.85
Trophozoite expressed 0.56 0.67
Schizont expressed 0.18 0.88
Gametocyte expressed 0.78 0.57

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1010700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.572 | MFS: -2.477 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IJT8

"Best" AlphaFill ligand hit: No AlphaFill hits

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
2.4.1.109 dolichyl-phosphate-mannose-protein mannosyltransferase CuSO4glycerolchymotrypsinphosphatidylinositol5-[[3,4-bis(phenylmethoxy)phenyl]methylene]-4-oxo-2-thioxo-3-thiazolidineacetic acid5-[[3,4-bis(phenylmethoxy)phenyl]methylene]-4-oxo-2-thioxo-3-thiazolidine acetic acid5-[[(3-(1-phenyl-2-hydroxy)ethoxy)-4-(2-phenylethoxy)phenyl]methylene]-4-oxo-2-thioxo-3-thiazolidineacetic acid5-[[(3-(1-phenyl-2-hydroxy)ethoxy)-4-(2-phenylethoxy)phenyl]methylene]-4-oxo-2-thioxo-3-thiazolidine acetic acid

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_102590

Most Similar Human Ortholog: K7ELI9

TM-align score: 0.88 | RMSD: 1.96

Seq Identity: 0.29 | Length: 104 / 223

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000128228 stromal cell derived factor 2 like 1
ENSG00000132581 stromal cell derived factor 2

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 2 16 7 10
disruptive 0 4 8 13
missense 0 4 8 11

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 25 5 12
disruptive 2 19 16 32
missense 0 16 13 21

PlasmoDB Total SNPs: 198

Non-coding: 186 | Synonymous: 7 | Nonsynonymous: 3 | Stop Codon: 2

Protein Information

Protein Length: 223 | Molecular Weight (kDa): 25.678

UniProt ID(s): Q8IJT8

PDB ID(s): None

Isoelectric Point: 6.92

Protein Domain Annotations:

Source Family ID Description
InterPro IPR036300 Mir domain superfamily
PFam N/A N/A
Superfamily SSF82109 Mir domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097
30379851 Identification of Plasmodium falciparum nuclear proteins by mass spectrometry andproposed protein annotation. Briquet S, Ourimi A, ..., Vaquero C 10.1371/journal.pone.0205596