Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.13 | 0.93 |
Trophozoite | expressed | 0.26 | 0.83 |
Schizont | expressed | 0.08 | 0.94 |
Gametocyte | not expressed | 0.15 | 0.91 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1011100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.151 | MFS: -2.845 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1209500)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJT4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 43 | 34 | 66 |
disruptive | 50 | 145 | 73 | 165 |
missense | 32 | 116 | 57 | 125 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 20 | 98 | 38 | 76 |
disruptive | 86 | 310 | 148 | 281 |
missense | 54 | 234 | 109 | 163 |
PlasmoDB Total SNPs: 253
Non-coding: 123 | Synonymous: 71 | Nonsynonymous: 59 | Stop Codon: 0
Protein Length: 983 | Molecular Weight (kDa): 118.884
UniProt ID(s): Q8IJT4
PDB ID(s): None
Isoelectric Point: 6.22
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |