Product Description: BET1-like protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0031201 | SNARE complex |
Function | GO:0005484 | SNAP receptor activity |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | nd | nd |
Trophozoite | not expressed | nd | nd |
Schizont | not expressed | nd | nd |
Gametocyte | not expressed | nd | nd |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1011200.2
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.128 | MFS: 0 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJT3
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_101026
Most Similar Human Ortholog: H7BXT7
TM-align score: 0.82 | RMSD: 1.09
Seq Identity: 0.10 | Length: 51 / 114
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000105829 | Bet1 golgi vesicular membrane trafficking protein |
ENSG00000177951 | Bet1 golgi vesicular membrane trafficking protein like |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 4 | 4 | 6 |
disruptive | 2 | 11 | 7 | 10 |
missense | 2 | 11 | 7 | 9 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 13 | 4 | 9 |
disruptive | 6 | 21 | 9 | 26 |
missense | 5 | 17 | 8 | 18 |
PlasmoDB Total SNPs: 45
Non-coding: 41 | Synonymous: 2 | Nonsynonymous: 2 | Stop Codon: 0
Protein Length: 114 | Molecular Weight (kDa): 13.901
UniProt ID(s): Q8IJT3
PDB ID(s): None
Isoelectric Point: 10.17
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR000727 | Target SNARE coiled-coil homology domain |
InterPro | IPR039897 | BET1-like protein |
PFam | N/A | N/A |
Superfamily | SSF58038 | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |