About Gene List

PF3D7_1011600

Genome location: Pf3D7_10_v3:445,004..447,552(-)

Genome classification: Core

Function and Localization

Product Description: heptatricopeptide repeat-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.10 0.95
Trophozoite possibly expressed 0.21 0.87
Schizont not expressed 0.07 0.95
Gametocyte not expressed 0.37 0.79

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1011600

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -0.707 | #Insertions: 8

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1210000)

  • Relative Growth Rate: 1.03 ± 0.18
  • Confidence: 4.86

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1210000)

Modification: Disrupted | RMgm-3213

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IJS9

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532755

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 27 19 35
disruptive 11 50 37 110
missense 11 50 35 103

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 7 63 22 50
disruptive 22 130 84 152
missense 15 109 79 122

PlasmoDB Total SNPs: 99

Non-coding: 45 | Synonymous: 40 | Nonsynonymous: 14 | Stop Codon: 0

Protein Information

Protein Length: 653 | Molecular Weight (kDa): 78.187

UniProt ID(s): Q8IJS9

PDB ID(s): None

Isoelectric Point: 8.66

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097