Product Description: heptatricopeptide repeat-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.10 | 0.95 |
Trophozoite | possibly expressed | 0.21 | 0.87 |
Schizont | not expressed | 0.07 | 0.95 |
Gametocyte | not expressed | 0.37 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1011600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.707 | #Insertions: 8
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1210000)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1210000)
Modification: Disrupted | RMgm-3213
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJS9
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 27 | 19 | 35 |
disruptive | 11 | 50 | 37 | 110 |
missense | 11 | 50 | 35 | 103 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 63 | 22 | 50 |
disruptive | 22 | 130 | 84 | 152 |
missense | 15 | 109 | 79 | 122 |
PlasmoDB Total SNPs: 99
Non-coding: 45 | Synonymous: 40 | Nonsynonymous: 14 | Stop Codon: 0
Protein Length: 653 | Molecular Weight (kDa): 78.187
UniProt ID(s): Q8IJS9
PDB ID(s): None
Isoelectric Point: 8.66
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |