About Gene List

PF3D7_1014400 (MRK)

Genome location: Pf3D7_10_v3:573,536..576,191(+)

Genome classification: Core

Function and Localization

Product Description: MO15-related protein kinase

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: 2.7.11.22 (Cyclin-dependent kinase)

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0000307 cyclin-dependent protein kinase holoenzyme complex
Component GO:0005737 cytoplasm
Component GO:0005634 nucleus
Function GO:0030332 cyclin binding
Function GO:0004693 cyclin-dependent protein serine/threonine kinase activity
Function GO:0005515 protein binding
Process GO:0000082 G1/S transition of mitotic cell cycle
Process GO:0008284 positive regulation of cell population proliferation
Process GO:0006468 protein phosphorylation
Process GO:0010389 regulation of G2/M transition of mitotic cell cycle
Process GO:0051726 regulation of cell cycle
Process GO:0010468 regulation of gene expression
Process GO:0007165 signal transduction

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 0.13 0.93
Trophozoite expressed 0.26 0.83
Schizont expressed 0.04 0.97
Gametocyte not expressed 0.06 0.97

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1014400

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.125 | MFS: -3.062 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1212800)

  • Relative Growth Rate: 0.10 ± nan
  • Confidence: 1.00

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IJQ1

"Best" AlphaFill ligand hit: 2AN (8-anilino-1-naphthalene sulfonate, Local RMSD=0.04) with 3PXF (Global RMSD=5.46)

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
2.7.11.22 cyclin-dependent kinase AMPDRBp16p18p21p27NMDATHZ1ICK1ICK2ICK3ICK4...

Orthology to BindingDB Entries:

UniProt Protein Name Species Homology Source BindingDB Ligands
P53779 Mitogen-activated protein kinase 10 Homo sapiens HOGENOM Pyrrole Carboxamide Analog 5bPyrrole Carboxamide Analog 5dPyrrole Carboxamide Analog 5gPyrrole Carboxamide Analog 5k...
P49187 Mitogen-activated protein kinase 10 Rattus norvegicus HOGENOM CHEMBL2376930Aminopyrazole inhibitor, 3576Aminopyrazole inhibitor, 3451CHEMBL571626...
P17157 Cyclin-dependent protein kinase PHO85 Saccharomyces cerevisiae HOGENOM, OrthoDB CHEMBL311228
O96526 Cell division related protein kinase 2 Leishmania major HOGENOM CHEMBL2171518CHEMBL2171517CHEMBL2171516CHEMBL2171515...
Q00535 Cyclin-dependent kinase 5 Homo sapiens HOGENOM, OrthoDB Xanthen-9-one, 1.0Xanthen-9-one, 1.1Xanthen-9-one, 1.04-aminothiazole, 2.0...
Q00534 Cyclin-dependent kinase 6 Homo sapiens HOGENOM, OrthoDB Fisetin (14)acs.jmedchem.1c00409_ST.789cid_5281607Flavopiridol...
P28482 Mitogen-activated protein kinase 1 Homo sapiens HOGENOM Pyrrole Carboxamide Analog 1Pyrrole Carboxamide Analog 5aPyrrole Carboxamide Analog 5bPyrrole Carboxamide Analog 5c...
P00546 Cyclin-dependent kinase 1 Saccharomyces cerevisiae HOGENOM, OrthoDB aloisine ACHEMBL311228Purvalanol APurvalanol B
O15264 Mitogen-activated protein kinase 13 Homo sapiens HOGENOM Aminopyrazole inhibitor, 3451US9187470, 62US9187470, 61diaryl urea compound 10...
P27361 Mitogen-activated protein kinase 3 Homo sapiens HOGENOM US8546404, 6US9796700, Compound I-1US9796700, Compound I-2US9796700, Compound I-3...
Q9DGD3 Cyclin-dependent kinase 1/G2/mitotic-specific cyclin-B Marthasterias glacialis HOGENOM, OrthoDB NU2058CHEMBL115498NU2058O6-Cyclohexylmethylguanine deriv. 7...
Q15759 Mitogen-activated protein kinase 11 Homo sapiens HOGENOM US10266537, Compound 93HL-7CHEMBL340687CHEMBL128756...
Q02399 Cyclin-dependent kinase 5 HOGENOM, OrthoDB Roscovitine
P63086 Mitogen-activated protein kinase 1 Rattus norvegicus HOGENOM 1-Acyl-1H-[1,2,4]triazole-3,5-diamine Analogue 3c1-Acyl-1H-[1,2,4]triazole-3,5-diamine Analogue 3f1-Acyl-1H-[1,2,4]triazole-3,5-diamine Analogue 3nCHEMBL550658...
Q9WTU6 Mitogen-activated protein kinase 9 Mus musculus HOGENOM CHEMBL2037224CHEMBL2037220CHEMBL2037209CHEMBL2037211...
P24941 Cyclin-dependent kinase 2/G1/S-specific cyclin-E1 Homo sapiens HOGENOM, OrthoDB US8507510, 1.14US8507510, 1.15US8507510, 1.18US8507510, 1.21...
Q9Z1B7 Mitogen-activated protein kinase 13 HOGENOM CHEMBL159932CHEMBL161197CHEMBL347592CHEMBL327632...
Q5MAI5 Cyclin-dependent kinase-like 4 HOGENOM, OrthoDB CHEMBL5190023
Q9WUI1 Mitogen-activated protein kinase 11 Mus musculus HOGENOM 2-arylpyridazin-3-one, 152-arylpyridazin-3-one, 182-arylpyridazin-3-one, 192-arylpyridazin-3-one, 20...
P63085 Mitogen-activated protein kinase 1 Mus musculus HOGENOM US8546404, 479US8546404, 459US8546404, 336US8546404, 469...
P50750 Cyclin-dependent kinase 9 Homo sapiens HOGENOM, OrthoDB CDK Inhibitor, 1CDK Inhibitor, 2CDK Inhibitor, 3CDK Inhibitor, 4...
P45984 Mitogen-activated protein kinase 9 Homo sapiens HOGENOM 9-hydroxy pyrazoloquinolinone 19-hydroxy pyrazoloquinolinone 22-pyridinecarboxamide deriv. 32-pyridinecarboxamide deriv. 8a...
P50613 Cyclin-dependent kinase 7 Homo sapiens OMA, OrthoDB MLS000665974CDK Inhibitor, 1CDK Inhibitor, 2CDK Inhibitor, 3...
P21127 Cyclin-dependent kinase 11B Homo sapiens OrthoDB CHEMBL4101411Indirubin derivative, 1
P06493 Cyclin-dependent kinase 1 Homo sapiens OrthoDB 4-(Phenylamino)pyrazolo[3,4-d]pyrimidine deriv. 124-(Phenylamino)pyrazolo[3,4-d]pyrimidine deriv. 144-(Phenylamino)pyrazolo[3,4-d]pyrimidine deriv. 154-(Phenylamino)pyrazolo[3,4-d]pyrimidine deriv. 18...
O94921 Cyclin-dependent kinase 14 Homo sapiens OrthoDB CHEMBL4281048CHEMBL4554744CHEMBL4534124CHEMBL4555069...
Q9UQ88 Cyclin-dependent kinase 11A Homo sapiens OrthoDB CHEMBL1989043CHEMBL5206282CHEMBL5169674CHEMBL5185655...
P11440 Cyclin-dependent kinase 1 Mus musculus OrthoDB Staurosporine, 8CHEMBL359486CHEMBL178945CHEMBL360304...
Q92772 Cyclin-dependent kinase-like 2 OrthoDB CHEMBL5190023
Q00536 Cyclin-Y/Cyclin-dependent kinase 16 OrthoDB US9163013, 1CHEMBL4281048Staurosporine, 8CHEMBL4580787...
P11802 Cyclin-dependent kinase 4/G1/S-specific cyclin-D1 Homo sapiens OrthoDB Indenopyrazole 5aIndenopyrazole 5bIndenopyrazole 5cIndenopyrazole 5d...
Q00526 Cyclin-dependent kinase 3 OrthoDB US9067888, 33US9067888, 34Staurosporine, 8CHEMBL489833...
Q07002 Cyclin-dependent kinase 18 OrthoDB Staurosporine, 8Staurosporine, 8
Q00537 Cyclin-Y/Cyclin-dependent kinase 17 OrthoDB Staurosporine, 8Staurosporine, 8
Q00532 Cyclin-dependent kinase-like 1 OrthoDB CHEMBL455428
P90584 MO15-related protein kinase Pfmrk Plasmodium falciparum OrthoMCL BLAST WR-289010WR-289009WR-289016cid_682361...

Orthology Information

Ortholog Group (OrthoMCL): OG6_128936

No human ortholog(s)

Protein Information

Protein Length: 324 | Molecular Weight (kDa): 37.988

UniProt ID(s): P90584, Q8IJQ1, Q9U6R3

PDB ID(s): None

Isoelectric Point: 8.06

Protein Domain Annotations:

Source Family ID Description
InterPro IPR000719 Protein kinase domain
InterPro IPR008266 Tyrosine-protein kinase, active site
InterPro IPR011009 Protein kinase-like domain superfamily
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR037770 Cyclin-dependent kinase 7
PFam PF00069 Protein kinase domain
Superfamily SSF56112 Protein kinase-like domain superfamily

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

No passing variants found

PlasmoDB Total SNPs: 83

Non-coding: 72 | Synonymous: 7 | Nonsynonymous: 4 | Stop Codon: 0

Associated Publications

PMID Title Authors DOI/Link
10717301 Cyclin H activation and drug susceptibility of the Pfmrk cyclin dependent proteinkinase from Plasmodium falciparum. Waters NC, Woodard CL, Prigge ST 10.1016/s0166-6851(99)00229-7
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097
16737745 Identification of an effector protein and gain-of-function mutants that activatePfmrk, a malarial cyclin-dependent protein kinase. Chen Y, Jirage D, ..., Waters NC 10.1016/j.molbiopara.2006.04.004
20332005 The malarial CDK Pfmrk and its effector PfMAT1 phosphorylate DNA replicationproteins and co-localize in the nucleus. Jirage D, Chen Y, ..., Waters NC https://pubmed.ncbi.nlm.nih.gov/20332005/
28611247 The Malaria Parasite Cyclin H Homolog Pf Cyc1 Is Required for Efficient Cytokinesis in Blood-Stage Plasmodium falciparum Robbins JA, Absalon S, Streva VA, Dvorin JD 10.1128/mBio.00605-17