About Gene List

PF3D7_1017600

Genome location: Pf3D7_10_v3:704,574..708,773(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005634 nucleus

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 1.11 0.51
Trophozoite expressed 1.23 0.40
Schizont expressed 0.32 0.81
Gametocyte not expressed 0.81 0.57

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1017600

Resistome Missense Mutations: N757D

Resistome Compounds with Missense Mutations: AN13762, AN13956

Resistome # Samples with Disruptive Mutations: 6 (6 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -0.19 | #Insertions: 2

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IJM3

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532605

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 18 49 15 47
disruptive 60 157 88 214
missense 28 103 67 143

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 31 80 29 45
disruptive 111 332 169 367
missense 56 219 95 191

PlasmoDB Total SNPs: 345

Non-coding: 100 | Synonymous: 135 | Nonsynonymous: 110 | Stop Codon: 0

Protein Information

Protein Length: 971 | Molecular Weight (kDa): 115.082

UniProt ID(s): Q8IJM3

PDB ID(s): None

Isoelectric Point: 5.04

Protein Domain Annotations:

Source Family ID Description
InterPro IPR024610 Inhibitor of growth protein, N-terminal histone-binding
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104
23181666 Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. Oehring SC, Woodcroft BJ, ..., Voss TS 10.1186/gb-2012-13-11-r108