Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | expressed | N/A | N/A |
| Ring | possibly expressed | 0.11 | 0.94 |
| Trophozoite | expressed | 0.15 | 0.91 |
| Schizont | possibly expressed | 0.18 | 0.88 |
| Gametocyte | expressed | 0.37 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1017700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 1.344 | #Insertions: 7
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJM2
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 21 | 15 | 26 |
| disruptive | 37 | 92 | 45 | 120 |
| missense | 17 | 57 | 33 | 85 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 11 | 43 | 19 | 29 |
| disruptive | 76 | 191 | 72 | 147 |
| missense | 26 | 127 | 46 | 85 |
PlasmoDB Total SNPs: 203
Non-coding: 121 | Synonymous: 48 | Nonsynonymous: 34 | Stop Codon: 0
Protein Length: 439 | Molecular Weight (kDa): 53.24
UniProt ID(s): Q8IJM2
PDB ID(s): None
Isoelectric Point: 10.97
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |