Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | expressed | 0.64 | 0.70 |
Trophozoite | expressed | 0.65 | 0.63 |
Schizont | expressed | 0.67 | 0.61 |
Gametocyte | expressed | 0.81 | 0.58 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1018700
Resistome Missense Mutations: Q76K
Resistome Compounds with Missense Mutations: AN13762
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.158 | #Insertions: 4
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJL5
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 37 | 19 | 40 |
disruptive | 27 | 109 | 55 | 133 |
missense | 16 | 91 | 51 | 104 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 71 | 25 | 45 |
disruptive | 63 | 225 | 84 | 234 |
missense | 36 | 174 | 61 | 142 |
PlasmoDB Total SNPs: 180
Non-coding: 127 | Synonymous: 31 | Nonsynonymous: 22 | Stop Codon: 0
Protein Length: 619 | Molecular Weight (kDa): 72.959
UniProt ID(s): Q8IJL5
PDB ID(s): None
Isoelectric Point: 9.64
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |