Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | not expressed | 0.19 | 0.90 |
Trophozoite | expressed | 0.20 | 0.88 |
Schizont | possibly expressed | 0.08 | 0.94 |
Gametocyte | possibly expressed | 0.30 | 0.82 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1018900
Resistome Missense Mutations: K308N
Resistome Compounds with Missense Mutations: AN13762
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.237 | MFS: -2.728 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJL3
"Best" AlphaFill ligand hit: AMP (adenosine monophosphate, Local RMSD=2.98) with 6JWQ (Global RMSD=8.36)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 41 | 15 | 37 |
disruptive | 30 | 73 | 57 | 110 |
missense | 25 | 72 | 52 | 106 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 14 | 63 | 21 | 50 |
disruptive | 48 | 190 | 82 | 215 |
missense | 38 | 166 | 68 | 136 |
PlasmoDB Total SNPs: 85
Non-coding: 19 | Synonymous: 41 | Nonsynonymous: 25 | Stop Codon: 0
Protein Length: 716 | Molecular Weight (kDa): 86.062
UniProt ID(s): Q8IJL3
PDB ID(s): None
Isoelectric Point: 8.65
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |