Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.07 | 0.97 |
| Trophozoite | not expressed | 0.14 | 0.92 |
| Schizont | possibly expressed | 1.41 | 0.43 |
| Gametocyte | expressed | 1.26 | 0.51 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1019100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 0.059 | #Insertions: 5
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0503300)
Modification: Disrupted | RMgm-1947
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJL1
"Best" AlphaFill ligand hit: NDP (nadph dihydro-nicotinamide-adenine-dinucleotide phosphate, Local RMSD=0.09) with 8JFB (Global RMSD=48.59)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 26 | 70 | 41 | 109 |
| disruptive | 105 | 300 | 177 | 384 |
| missense | 74 | 238 | 156 | 312 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 37 | 136 | 75 | 143 |
| disruptive | 195 | 626 | 260 | 530 |
| missense | 120 | 493 | 206 | 375 |
PlasmoDB Total SNPs: 373
Non-coding: 61 | Synonymous: 146 | Nonsynonymous: 165 | Stop Codon: 1
Protein Length: 1928 | Molecular Weight (kDa): 229.174
UniProt ID(s): Q8IJL1
PDB ID(s): None
Isoelectric Point: 9.51
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |