Product Description: zinc finger protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.13 | 0.94 |
Trophozoite | not expressed | 0.41 | 0.77 |
Schizont | expressed | 0.53 | 0.73 |
Gametocyte | expressed | 0.85 | 0.56 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1019300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.119 | #Insertions: 4
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0503500)
Modification: Disrupted | RMgm-1948
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A144A1F0
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 20 | 76 | 48 | 96 |
disruptive | 68 | 272 | 165 | 355 |
missense | 46 | 200 | 138 | 285 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 39 | 155 | 77 | 140 |
disruptive | 142 | 554 | 285 | 547 |
missense | 80 | 433 | 238 | 397 |
PlasmoDB Total SNPs: 449
Non-coding: 255 | Synonymous: 119 | Nonsynonymous: 75 | Stop Codon: 0
Protein Length: 1772 | Molecular Weight (kDa): 208.852
UniProt ID(s): A0A144A1F0
PDB ID(s): None
Isoelectric Point: 5.13
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR000571 | Zinc finger, CCCH-type |
InterPro | IPR036855 | Zinc finger, CCCH-type superfamily |
PFam | PF00642 | Zinc finger, CCCH-type |
Superfamily | SSF90229 | Zinc finger, CCCH-type superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |