Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.12 | 0.94 |
| Trophozoite | expressed | 0.74 | 0.60 |
| Schizont | possibly expressed | 0.17 | 0.89 |
| Gametocyte | not expressed | 0.25 | 0.86 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1024900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.18 | MFS: -2.735 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJF5
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 18 | 44 | 29 | 69 |
| disruptive | 149 | 204 | 100 | 237 |
| missense | 55 | 145 | 81 | 163 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 26 | 97 | 52 | 80 |
| disruptive | 198 | 372 | 179 | 335 |
| missense | 87 | 246 | 131 | 220 |
PlasmoDB Total SNPs: 367
Non-coding: 63 | Synonymous: 167 | Nonsynonymous: 137 | Stop Codon: 0
Protein Length: 1571 | Molecular Weight (kDa): 190.4
UniProt ID(s): Q8IJF5
PDB ID(s): None
Isoelectric Point: 8.14
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |