Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | expressed | N/A | N/A |
| Ring | possibly expressed | 0.10 | 0.95 |
| Trophozoite | possibly expressed | 0.24 | 0.86 |
| Schizont | expressed | 0.07 | 0.96 |
| Gametocyte | expressed | 0.72 | 0.62 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1027000
Resistome Missense Mutations: D126E
Resistome Compounds with Missense Mutations: TCMDC-124553/MMV019869
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.655 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_0511100)
Modification: Other | RMgm-475
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJD3
"Best" AlphaFill ligand hit: TBR (dodecabromohexatantalum, Local RMSD=0.07) with 2BVL (Global RMSD=27.29)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 26 | 82 | 54 | 104 |
| disruptive | 116 | 303 | 153 | 331 |
| missense | 40 | 202 | 126 | 246 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 44 | 158 | 70 | 127 |
| disruptive | 221 | 553 | 229 | 484 |
| missense | 92 | 383 | 160 | 337 |
PlasmoDB Total SNPs: 437
Non-coding: 80 | Synonymous: 224 | Nonsynonymous: 133 | Stop Codon: 0
Protein Length: 1811 | Molecular Weight (kDa): 216.655
UniProt ID(s): Q8IJD3
PDB ID(s): None
Isoelectric Point: 5.69
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |