Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | nd | nd |
Trophozoite | expressed | nd | nd |
Schizont | possibly expressed | nd | nd |
Gametocyte | not expressed | nd | nd |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1029100.2
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.129 | MFS: -3.073 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A143ZYR7
"Best" AlphaFill ligand hit: UDP (uridine-5'-diphosphate, Local RMSD=0.61) with 6H4M (Global RMSD=19.53)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 45 | 31 | 80 |
disruptive | 42 | 163 | 89 | 234 |
missense | 32 | 144 | 83 | 208 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 14 | 98 | 59 | 101 |
disruptive | 81 | 329 | 177 | 343 |
missense | 53 | 278 | 152 | 265 |
PlasmoDB Total SNPs: 156
Non-coding: 52 | Synonymous: 65 | Nonsynonymous: 39 | Stop Codon: 0
Protein Length: 1396 | Molecular Weight (kDa): 168.497
UniProt ID(s): Q8IJB4
PDB ID(s): None
Isoelectric Point: 9.46
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |