About Gene List

PF3D7_1029100

Genome location: Pf3D7_10_v3:1,189,990..1,195,098(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed nd nd
Trophozoite expressed nd nd
Schizont possibly expressed nd nd
Gametocyte not expressed nd nd

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1029100.2

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.129 | MFS: -3.073 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A143ZYR7

"Best" AlphaFill ligand hit: UDP (uridine-5'-diphosphate, Local RMSD=0.61) with 6H4M (Global RMSD=19.53)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533023

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 9 45 31 80
disruptive 42 163 89 234
missense 32 144 83 208

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 14 98 59 101
disruptive 81 329 177 343
missense 53 278 152 265

PlasmoDB Total SNPs: 156

Non-coding: 52 | Synonymous: 65 | Nonsynonymous: 39 | Stop Codon: 0

Protein Information

Protein Length: 1396 | Molecular Weight (kDa): 168.497

UniProt ID(s): Q8IJB4

PDB ID(s): None

Isoelectric Point: 9.46

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097