About Gene List

PF3D7_1030800

Genome location: Pf3D7_10_v3:1,249,480..1,250,925(+)

Genome classification: Core

Function and Localization

Product Description: calmodulin, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Function GO:0005509 calcium ion binding

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.04 0.98
Trophozoite not expressed 0.21 0.88
Schizont possibly expressed 1.01 0.47
Gametocyte possibly expressed 0.72 0.61

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1030800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.343 | MFS: -3.035 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IJ97

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_139425

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 2 6 7 20
disruptive 2 21 12 30
missense 2 21 11 28

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 2 18 11 21
disruptive 7 53 26 47
missense 5 46 20 39

PlasmoDB Total SNPs: 108

Non-coding: 86 | Synonymous: 15 | Nonsynonymous: 7 | Stop Codon: 0

Protein Information

Protein Length: 212 | Molecular Weight (kDa): 25.411

UniProt ID(s): Q8IJ97

PDB ID(s): None

Isoelectric Point: 5.26

Protein Domain Annotations:

Source Family ID Description
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand domain pair
InterPro IPR018247 EF-Hand 1, calcium-binding site
PFam N/A N/A
Superfamily SSF47473 EF-hand domain pair

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097