Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: MSIGHFIFILLILCILNVRDIKT
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.05 | 0.97 |
Trophozoite | expressed | 0.11 | 0.93 |
Schizont | possibly expressed | 0.08 | 0.95 |
Gametocyte | expressed | 0.37 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1031900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 3 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.329 | #Insertions: 4
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6S3D9
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 25 | 21 | 44 |
disruptive | 18 | 39 | 17 | 51 |
missense | 18 | 38 | 17 | 47 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 59 | 34 | 51 |
disruptive | 26 | 70 | 43 | 84 |
missense | 25 | 59 | 38 | 57 |
PlasmoDB Total SNPs: 194
Non-coding: 150 | Synonymous: 24 | Nonsynonymous: 20 | Stop Codon: 0
Protein Length: 600 | Molecular Weight (kDa): 71.554
UniProt ID(s): C6S3D9
PDB ID(s): None
Isoelectric Point: 7.11
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |