Product Description: ADP-ribosylation factor, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005794 | Golgi apparatus |
Component | GO:0005737 | cytoplasm |
Function | GO:0005525 | GTP binding |
Process | GO:0006886 | intracellular protein transport |
Process | GO:0016192 | vesicle-mediated transport |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | possibly expressed | 0.09 | 0.94 |
Schizont | expressed | 0.20 | 0.86 |
Gametocyte | expressed | 0.06 | 0.96 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1034700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.49 | MFS: -2.895 | #Insertions: 1
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0518500)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0518500)
Modification: Disrupted | RMgm-2026
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IJ63
"Best" AlphaFill ligand hit: BEZ (benzoic acid, Local RMSD=0.03) with 1S8F (Global RMSD=4.82)
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_103249
Most Similar Human Ortholog: P40616
TM-align score: 0.94 | RMSD: 1.79
Seq Identity: 0.61 | Length: 178 / 178
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000120805 | ADP ribosylation factor like GTPase 1 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
No passing variants found
PlasmoDB Total SNPs: 89
Non-coding: 83 | Synonymous: 4 | Nonsynonymous: 1 | Stop Codon: 1
Protein Length: 178 | Molecular Weight (kDa): 20.248
UniProt ID(s): O00818, Q8IJ63, Q9U464
PDB ID(s): None
Isoelectric Point: 8.79
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR005225 | Small GTP-binding protein domain |
InterPro | IPR006689 | Small GTPase superfamily, ARF/SAR type |
InterPro | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PFam | PF00025 | Small GTPase superfamily, ARF/SAR type |
Superfamily | SSF52540 | P-loop containing nucleoside triphosphate hydrolase |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |