About Gene List

PF3D7_1034700

Genome location: Pf3D7_10_v3:1,378,257..1,379,876(+)

Genome classification: Core

Function and Localization

Product Description: ADP-ribosylation factor, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005794 Golgi apparatus
Component GO:0005737 cytoplasm
Function GO:0005525 GTP binding
Process GO:0006886 intracellular protein transport
Process GO:0016192 vesicle-mediated transport

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.01 1.00
Trophozoite possibly expressed 0.09 0.94
Schizont expressed 0.20 0.86
Gametocyte expressed 0.06 0.96

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1034700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.49 | MFS: -2.895 | #Insertions: 1

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0518500)

  • Relative Growth Rate: 1.00 ± 0.07
  • Confidence: 6.76

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0518500)

Modification: Disrupted | RMgm-2026

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IJ63

"Best" AlphaFill ligand hit: BEZ (benzoic acid, Local RMSD=0.03) with 1S8F (Global RMSD=4.82)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_103249

Most Similar Human Ortholog: P40616

TM-align score: 0.94 | RMSD: 1.79

Seq Identity: 0.61 | Length: 178 / 178

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000120805 ADP ribosylation factor like GTPase 1

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

No passing variants found

PlasmoDB Total SNPs: 89

Non-coding: 83 | Synonymous: 4 | Nonsynonymous: 1 | Stop Codon: 1

Protein Information

Protein Length: 178 | Molecular Weight (kDa): 20.248

UniProt ID(s): O00818, Q8IJ63, Q9U464

PDB ID(s): None

Isoelectric Point: 8.79

Protein Domain Annotations:

Source Family ID Description
InterPro IPR005225 Small GTP-binding protein domain
InterPro IPR006689 Small GTPase superfamily, ARF/SAR type
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
PFam PF00025 Small GTPase superfamily, ARF/SAR type
Superfamily SSF52540 P-loop containing nucleoside triphosphate hydrolase

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097