Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | expressed | N/A | N/A |
| Ring | expressed | 0.10 | 0.95 |
| Trophozoite | expressed | 0.05 | 0.97 |
| Schizont | expressed | 1.34 | 0.53 |
| Gametocyte | expressed | 1.11 | 0.50 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1108100
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.799 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IIS1
"Best" AlphaFill ligand hit: ABH (2(s)-amino-6-boronohexanoic acid, Local RMSD=0.73) with 3MMR (Global RMSD=38.26)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 12 | 59 | 28 | 97 |
| disruptive | 53 | 207 | 105 | 270 |
| missense | 32 | 172 | 83 | 216 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 17 | 130 | 48 | 84 |
| disruptive | 103 | 426 | 203 | 370 |
| missense | 64 | 336 | 157 | 246 |
PlasmoDB Total SNPs: 370
Non-coding: 80 | Synonymous: 162 | Nonsynonymous: 128 | Stop Codon: 0
Protein Length: 1368 | Molecular Weight (kDa): 162.412
UniProt ID(s): Q8IIS1
PDB ID(s): None
Isoelectric Point: 4.69
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |