Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | no data | N/A | N/A |
Ring | no data | 0.09 | 0.95 |
Trophozoite | no data | 0.10 | 0.94 |
Schizont | no data | 0.02 | 0.99 |
Gametocyte | no data | 0.33 | 0.81 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1109200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.318 | MFS: -2.449 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6S3E7
"Best" AlphaFill ligand hit: HEM (heme, Local RMSD=0.81) with 7OW9 (Global RMSD=52.81)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 23 | 12 | 23 |
disruptive | 3 | 35 | 19 | 58 |
missense | 3 | 31 | 18 | 55 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 43 | 21 | 26 |
disruptive | 9 | 77 | 43 | 88 |
missense | 4 | 67 | 38 | 68 |
PlasmoDB Total SNPs: 103
Non-coding: 82 | Synonymous: 18 | Nonsynonymous: 3 | Stop Codon: 0
Protein Length: 385 | Molecular Weight (kDa): 46.507
UniProt ID(s): C6S3E7
PDB ID(s): None
Isoelectric Point: 5.63
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |