About Gene List

PF3D7_1110800

Genome location: Pf3D7_11_v3:429,897..431,828(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.01 0.99
Trophozoite no data 0.06 0.96
Schizont no data 0.05 0.97
Gametocyte no data 0.98 0.51

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1110800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.121 | MFS: -3.226 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6S3E9

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_104978

Most Similar Human Ortholog: R4GN71

TM-align score: 0.71 | RMSD: 2.15

Seq Identity: 0.08 | Length: 77 / 201

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000162814 spermatogenesis associated 17

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 0 12 5 9
disruptive 0 19 18 31
missense 0 19 16 28

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 2 22 8 11
disruptive 7 54 30 43
missense 3 43 23 35

PlasmoDB Total SNPs: 140

Non-coding: 137 | Synonymous: 2 | Nonsynonymous: 1 | Stop Codon: 0

Protein Information

Protein Length: 201 | Molecular Weight (kDa): 24.676

UniProt ID(s): C6S3E9

PDB ID(s): None

Isoelectric Point: 10.6

Protein Domain Annotations:

Source Family ID Description
InterPro IPR000048 IQ motif, EF-hand binding site
PFam PF00612 IQ motif, EF-hand binding site
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097