Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.04 | 0.98 |
Trophozoite | not expressed | 0.13 | 0.92 |
Schizont | not expressed | 0.15 | 0.90 |
Gametocyte | not expressed | 0.42 | 0.76 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1112700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.655 | #Insertions: 19
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IIN6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_104125
Most Similar Human Ortholog: Q86Y56
TM-align score: 0.78 | RMSD: 4.78
Seq Identity: 0.12 | Length: 795 / 1159
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000164818 | dynein axonemal assembly factor 5 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 13 | 47 | 22 | 71 |
disruptive | 47 | 133 | 86 | 188 |
missense | 41 | 132 | 83 | 177 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 18 | 80 | 49 | 81 |
disruptive | 79 | 259 | 134 | 263 |
missense | 64 | 235 | 121 | 231 |
PlasmoDB Total SNPs: 167
Non-coding: 47 | Synonymous: 59 | Nonsynonymous: 61 | Stop Codon: 0
Protein Length: 1159 | Molecular Weight (kDa): 139.228
UniProt ID(s): Q8IIN6
PDB ID(s): None
Isoelectric Point: 7.23
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR016024 | Armadillo-type fold |
PFam | N/A | N/A |
Superfamily | SSF48371 | Armadillo-type fold |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |