About Gene List

PF3D7_1112700

Genome location: Pf3D7_11_v3:481,830..485,831(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.04 0.98
Trophozoite not expressed 0.13 0.92
Schizont not expressed 0.15 0.90
Gametocyte not expressed 0.42 0.76

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1112700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -0.655 | #Insertions: 19

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IIN6

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_104125

Most Similar Human Ortholog: Q86Y56

TM-align score: 0.78 | RMSD: 4.78

Seq Identity: 0.12 | Length: 795 / 1159

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000164818 dynein axonemal assembly factor 5

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 13 47 22 71
disruptive 47 133 86 188
missense 41 132 83 177

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 18 80 49 81
disruptive 79 259 134 263
missense 64 235 121 231

PlasmoDB Total SNPs: 167

Non-coding: 47 | Synonymous: 59 | Nonsynonymous: 61 | Stop Codon: 0

Protein Information

Protein Length: 1159 | Molecular Weight (kDa): 139.228

UniProt ID(s): Q8IIN6

PDB ID(s): None

Isoelectric Point: 7.23

Protein Domain Annotations:

Source Family ID Description
InterPro IPR016024 Armadillo-type fold
PFam N/A N/A
Superfamily SSF48371 Armadillo-type fold

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097