Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.06 | 0.97 |
Trophozoite | not expressed | 0.20 | 0.90 |
Schizont | not expressed | 1.73 | 0.39 |
Gametocyte | not expressed | 0.41 | 0.80 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1113000
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 4 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.862 | #Insertions: 20
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_0934600)
Modification: Other | RMgm-478
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 51 | 269 | 164 | 363 |
disruptive | 224 | 839 | 449 | 1062 |
missense | 201 | 776 | 416 | 969 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 91 | 513 | 240 | 381 |
disruptive | 415 | 1601 | 713 | 1444 |
missense | 336 | 1406 | 621 | 1097 |
PlasmoDB Total SNPs: 797
Non-coding: 207 | Synonymous: 284 | Nonsynonymous: 306 | Stop Codon: 0
Protein Length: 5951 | Molecular Weight (kDa): 713.426
UniProt ID(s): None
PDB ID(s): None
Isoelectric Point: 9.4
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |