Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 6
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | possibly expressed | 0.07 | 0.97 |
| Trophozoite | expressed | 0.64 | 0.64 |
| Schizont | expressed | 0.47 | 0.72 |
| Gametocyte | expressed | 0.36 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1113800
Resistome Missense Mutations: L476F
Resistome Compounds with Missense Mutations: MMV982556
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.12 | MFS: -3.023 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0933800)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0933800)
Modification: Disrupted | RMgm-2648
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IIM4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 3 | 22 | 21 | 25 |
| disruptive | 7 | 38 | 30 | 66 |
| missense | 4 | 36 | 28 | 60 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 53 | 23 | 40 |
| disruptive | 11 | 98 | 53 | 112 |
| missense | 7 | 75 | 46 | 82 |
PlasmoDB Total SNPs: 110
Non-coding: 89 | Synonymous: 15 | Nonsynonymous: 6 | Stop Codon: 0
Protein Length: 702 | Molecular Weight (kDa): 85.752
UniProt ID(s): Q8IIM4
PDB ID(s): None
Isoelectric Point: 9.52
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |