Product Description: filamin domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Process | GO:0009657 | plastid organization |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.13 | 0.93 |
Trophozoite | not expressed | 0.29 | 0.84 |
Schizont | expressed | 1.33 | 0.42 |
Gametocyte | expressed | 0.58 | 0.69 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1114900
Resistome Missense Mutations: C575F
Resistome Compounds with Missense Mutations: MMV020746
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.138 | MFS: -2.828 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0932800)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IIL3
"Best" AlphaFill ligand hit: FMN (flavin mononucleotide, Local RMSD=0.22) with 1TV5 (Global RMSD=18.21)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 21 | 113 | 56 | 164 |
disruptive | 68 | 253 | 165 | 406 |
missense | 53 | 219 | 142 | 353 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 39 | 215 | 100 | 158 |
disruptive | 148 | 560 | 268 | 586 |
missense | 94 | 457 | 232 | 451 |
PlasmoDB Total SNPs: 318
Non-coding: 33 | Synonymous: 202 | Nonsynonymous: 82 | Stop Codon: 1
Protein Length: 2480 | Molecular Weight (kDa): 295.379
UniProt ID(s): Q8IIL3
PDB ID(s): None
Isoelectric Point: 8.05
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR014756 | Immunoglobulin E-set |
InterPro | IPR017868 | Filamin/ABP280 repeat-like |
PFam | PF00630 | Filamin/ABP280 repeat-like |
Superfamily | SSF81296 | Immunoglobulin E-set |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
30726238 | A mutagenesis screen for essential plastid biogenesis genes in human malariaparasites. | Tang Y, Meister TR, ..., Yeh E | 10.1371/journal.pbio.3000136 |