About Gene List

PF3D7_1116900

Genome location: Pf3D7_11_v3:644,100..645,537(-)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite no data N/A N/A
Ring no data 0.00 1.00
Trophozoite no data 0.01 0.99
Schizont no data 0.11 0.93
Gametocyte no data 0.35 0.81

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1116900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 1 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.818 | MFS: -1.914 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A144A0T9

"Best" AlphaFill ligand hit: SAH (s-adenosyl-l-homocysteine, Local RMSD=6.88) with 3BGV (Global RMSD=20.28)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_160740

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 2 13 6 15
disruptive 3 5 6 16
missense 3 4 6 15

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 22 12 13
disruptive 6 21 17 39
missense 4 18 16 29

PlasmoDB Total SNPs: 120

Non-coding: 100 | Synonymous: 16 | Nonsynonymous: 4 | Stop Codon: 0

Protein Information

Protein Length: 212 | Molecular Weight (kDa): 23.64

UniProt ID(s): A0A144A0T9

PDB ID(s): None

Isoelectric Point: 7.58

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097