Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.04 | 0.98 |
Trophozoite | not expressed | 0.13 | 0.93 |
Schizont | not expressed | 0.21 | 0.87 |
Gametocyte | not expressed | 1.04 | 0.50 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1122600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 1 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.496 | #Insertions: 9
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IIE0
"Best" AlphaFill ligand hit: TEW (6-tungstotellurate(vi), Local RMSD=0.12) with 6NYS (Global RMSD=17.68)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 67 | 40 | 96 |
disruptive | 20 | 138 | 107 | 228 |
missense | 20 | 133 | 104 | 213 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 10 | 150 | 62 | 105 |
disruptive | 61 | 330 | 148 | 327 |
missense | 41 | 282 | 124 | 264 |
PlasmoDB Total SNPs: 382
Non-coding: 299 | Synonymous: 57 | Nonsynonymous: 26 | Stop Codon: 0
Protein Length: 1832 | Molecular Weight (kDa): 217.704
UniProt ID(s): Q8IIE0
PDB ID(s): None
Isoelectric Point: 7.73
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |