About Gene List

PF3D7_1123000

Genome location: Pf3D7_11_v3:895,885..906,868(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring expressed 2.15 0.25
Trophozoite expressed 1.75 0.25
Schizont expressed 1.45 0.35
Gametocyte expressed 1.30 0.40

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1123000

Resistome Missense Mutations: D580N

Resistome Compounds with Missense Mutations: BCH070

Resistome # Samples with Disruptive Mutations: 5 (2 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.991 | MFS: -2.752 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IID3

"Best" AlphaFill ligand hit: DTP (, Local RMSD=4.21) with 5OLK (Global RMSD=29.20)

No associated EC numbers

Orthology to BindingDB Entries:

UniProt Protein Name Species Homology Source BindingDB Ligands
O75376 Nuclear receptor corepressor 1 Homo sapiens OrthoDB VorinostatCHEMBL4065412CHEMBL4170617Vorinostat...
Q9Y618 Histone deacetylase 3/Nuclear receptor corepressor 2 [395-489] OrthoDB MLS000073507MLS000075822MLS000038796MLS000077721...

Orthology Information

Ortholog Group (OrthoMCL): OG6_532441

No human ortholog(s)

Protein Information

Protein Length: 2467 | Molecular Weight (kDa): 292.909

UniProt ID(s): Q8IID3, Q9GVB4

PDB ID(s): None

Isoelectric Point: 9.74

Protein Domain Annotations:

Source Family ID Description
InterPro IPR001005 SANT/Myb domain
InterPro IPR009057 Homeobox-like domain superfamily
PFam N/A N/A
Superfamily SSF46689 Homeobox-like domain superfamily

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 41 85 62 120
disruptive 104 362 179 407
missense 62 250 139 289

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 57 186 88 143
disruptive 226 738 319 716
missense 117 496 232 435

PlasmoDB Total SNPs: 522

Non-coding: 185 | Synonymous: 216 | Nonsynonymous: 121 | Stop Codon: 0

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104