About Gene List

PF3D7_1132500

Genome location: Pf3D7_11_v3:1,261,759..1,266,078(+)

Genome classification: Core

Function and Localization

Product Description: amino acid transporter, putative

SignalP Peptide: N/A

# Transmembrane Domains: 15

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005886 plasma membrane
Process GO:0035725 sodium ion transmembrane transport

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.01 0.99
Trophozoite not expressed 0.03 0.98
Schizont possibly expressed 0.06 0.96
Gametocyte possibly expressed 0.13 0.93

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1132500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -0.049 | #Insertions: 7

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PY17X_0917400)

Modification: Disrupted | RMgm-4771

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8II40

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_171430

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 18 81 38 85
disruptive 58 192 107 228
missense 49 180 99 204

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 28 136 78 95
disruptive 104 420 161 380
missense 72 363 135 264

PlasmoDB Total SNPs: 115

Non-coding: 0 | Synonymous: 63 | Nonsynonymous: 52 | Stop Codon: 0

Protein Information

Protein Length: 1439 | Molecular Weight (kDa): 174.052

UniProt ID(s): Q8II40

PDB ID(s): None

Isoelectric Point: 9.64

Protein Domain Annotations:

Source Family ID Description
InterPro IPR000175 Sodium:neurotransmitter symporter
InterPro IPR037272 Sodium:neurotransmitter symporter superfamily
PFam PF00209 Sodium:neurotransmitter symporter
Superfamily SSF161070 Sodium:neurotransmitter symporter superfamily

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097