About Gene List

PF3D7_1133500

Genome location: Pf3D7_11_v3:1,296,801..1,298,199(+)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring not expressed 0.03 0.98
Trophozoite expressed 0.22 0.86
Schizont expressed 0.07 0.95
Gametocyte expressed 0.14 0.91

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1133500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.124 | MFS: -2.827 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0914900)

  • Relative Growth Rate: 0.11 ± 0.03
  • Confidence: 8.36

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8II30

"Best" AlphaFill ligand hit: UMP (2'-deoxyuridine 5'-monophosphate, Local RMSD=0.04) with 6A2L (Global RMSD=19.20)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_156404

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 12 4 9
disruptive 5 20 14 45
missense 5 20 14 40

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 7 17 8 18
disruptive 11 53 23 73
missense 7 41 21 60

PlasmoDB Total SNPs: 37

Non-coding: 25 | Synonymous: 8 | Nonsynonymous: 3 | Stop Codon: 1

Protein Information

Protein Length: 392 | Molecular Weight (kDa): 48.097

UniProt ID(s): Q8II30

PDB ID(s): None

Isoelectric Point: 9.43

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097