Genome location: Pf3D7_11_v3:1,440,742..1,445,784(+)
Genome classification: Core
Product Description: modulator of ring stage translation MRST
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Process | GO:0009410 | response to xenobiotic stimulus |
Process | GO:0042254 | ribosome biogenesis |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 1.34 | 0.43 |
Trophozoite | expressed | 0.80 | 0.58 |
Schizont | possibly expressed | 0.36 | 0.80 |
Gametocyte | possibly expressed | 0.60 | 0.67 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1136600
Resistome Missense Mutations: S1088N
Resistome Compounds with Missense Mutations: GNF179/KAF179
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.123 | MFS: -2.986 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_0912000)
Modification: Other | RMgm-429
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IHZ8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 73 | 36 | 87 |
disruptive | 89 | 298 | 153 | 322 |
missense | 52 | 226 | 118 | 247 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 24 | 133 | 49 | 108 |
disruptive | 169 | 533 | 204 | 405 |
missense | 107 | 407 | 158 | 250 |
PlasmoDB Total SNPs: 335
Non-coding: 74 | Synonymous: 120 | Nonsynonymous: 141 | Stop Codon: 0
Protein Length: 1322 | Molecular Weight (kDa): 156.665
UniProt ID(s): Q8IHZ8
PDB ID(s): None
Isoelectric Point: 4.72
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
37219373 | A novel Modulator of Ring Stage Translation (MRST) gene alters artemisininsensitivity in Plasmodium falciparum | Simmons C, Gibbons J, ..., Adams JH | 10.1128/msphere.00152-23 |