Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.01 | 1.00 |
Schizont | not expressed | 0.01 | 1.00 |
Gametocyte | not expressed | 0.36 | 0.81 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1137900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.85 | MFS: -3.024 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IHY6
"Best" AlphaFill ligand hit: PGO (s-1,2-propanediol, Local RMSD=0.07) with 4EGW (Global RMSD=38.61)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 38 | 23 | 57 |
disruptive | 31 | 187 | 97 | 205 |
missense | 28 | 182 | 95 | 193 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 74 | 43 | 60 |
disruptive | 64 | 374 | 111 | 251 |
missense | 54 | 343 | 105 | 185 |
PlasmoDB Total SNPs: 115
Non-coding: 44 | Synonymous: 30 | Nonsynonymous: 40 | Stop Codon: 1
Protein Length: 762 | Molecular Weight (kDa): 91.73
UniProt ID(s): Q8IHY6
PDB ID(s): None
Isoelectric Point: 8.82
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |