Product Description: P-loop containing nucleoside triphosphate hydrolase, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: 3.6.1.15 (Nucleoside-triphosphate phosphatase)
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | possibly expressed | 0.08 | 0.94 |
Schizont | possibly expressed | 0.06 | 0.96 |
Gametocyte | expressed | 0.43 | 0.75 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1140300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.613 | MFS: -3.206 | #Insertions: 1
PlasmoGEM Phenotype: Slow (Pb ortholog: PBANKA_0908700)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0908700)
Modification: Disrupted | RMgm-2514
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IHW2
"Best" AlphaFill ligand hit: No AlphaFill hits
BRENDA EC Inhibitors:
EC # | Name | EC Inhibitors |
---|---|---|
3.6.1.15 | nucleoside-triphosphate phosphatase | ATPADPNaFRNAEDTAdATPdTTPdCTPdGTPHOClrNTPMgCl2... |
No evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 18 | 12 | 22 |
disruptive | 7 | 27 | 13 | 43 |
missense | 6 | 27 | 13 | 38 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 36 | 18 | 28 |
disruptive | 12 | 57 | 38 | 88 |
missense | 9 | 49 | 31 | 56 |
PlasmoDB Total SNPs: 155
Non-coding: 140 | Synonymous: 2 | Nonsynonymous: 12 | Stop Codon: 1
Protein Length: 361 | Molecular Weight (kDa): 42.756
UniProt ID(s): Q8IHW2
PDB ID(s): None
Isoelectric Point: 8.56
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
InterPro | IPR030547 | DNA repair protein XRCC2 |
PFam | N/A | N/A |
Superfamily | SSF52540 | P-loop containing nucleoside triphosphate hydrolase |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |