Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | not expressed | 0.06 | 0.97 |
Schizont | not expressed | 0.03 | 0.98 |
Gametocyte | not expressed | 0.32 | 0.82 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1141000
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 1 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.578 | MFS: -2.461 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IHV5
"Best" AlphaFill ligand hit: FAD (flavin-adenine dinucleotide, Local RMSD=18.85) with 3JQQ (Global RMSD=40.62)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 30 | 25 | 47 |
disruptive | 20 | 131 | 83 | 175 |
missense | 17 | 113 | 79 | 157 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 13 | 80 | 28 | 60 |
disruptive | 68 | 292 | 135 | 223 |
missense | 44 | 252 | 121 | 171 |
PlasmoDB Total SNPs: 97
Non-coding: 0 | Synonymous: 58 | Nonsynonymous: 38 | Stop Codon: 1
Protein Length: 823 | Molecular Weight (kDa): 99.655
UniProt ID(s): Q8IHV5
PDB ID(s): None
Isoelectric Point: 10.18
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |