Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.07 | 0.97 |
Trophozoite | not expressed | 0.07 | 0.96 |
Schizont | not expressed | 0.03 | 0.98 |
Gametocyte | possibly expressed | 1.09 | 0.55 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1141100
Resistome Missense Mutations: N324H, K2046N
Resistome Compounds with Missense Mutations: Lopinavir, MMV023367
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.393 | #Insertions: 6
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IHV4
"Best" AlphaFill ligand hit: DTP (, Local RMSD=5.53) with 2JAS (Global RMSD=12.86)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 23 | 117 | 73 | 148 |
disruptive | 110 | 462 | 253 | 635 |
missense | 76 | 379 | 222 | 547 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 35 | 234 | 97 | 174 |
disruptive | 250 | 921 | 418 | 805 |
missense | 155 | 769 | 362 | 571 |
PlasmoDB Total SNPs: 301
Non-coding: 0 | Synonymous: 159 | Nonsynonymous: 141 | Stop Codon: 1
Protein Length: 2563 | Molecular Weight (kDa): 304.041
UniProt ID(s): Q8IHV4
PDB ID(s): None
Isoelectric Point: 9.54
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |