About Gene List

PF3D7_1146800

Genome location: Pf3D7_11_v3:1,843,205..1,854,563(-)

Genome classification: Core

Function and Localization

Product Description: female development protein FD2, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.01 0.99
Trophozoite not expressed 0.04 0.98
Schizont not expressed 0.04 0.98
Gametocyte expressed 1.41 0.49

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1146800

Resistome Missense Mutations: N2236D

Resistome Compounds with Missense Mutations: GNF-Pf-3600

Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -1.589 | #Insertions: 5

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PBANKA_0902300)

Modification: Tagged | RMgm-5362

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: N/A

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533487

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 36 188 84 205
disruptive 166 687 334 733
missense 98 540 280 580

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 79 341 137 230
disruptive 336 1414 512 1075
missense 201 1051 401 661

PlasmoDB Total SNPs: 555

Non-coding: 121 | Synonymous: 267 | Nonsynonymous: 166 | Stop Codon: 1

Protein Information

Protein Length: 3188 | Molecular Weight (kDa): 375.412

UniProt ID(s): Q8IHQ0

PDB ID(s): None

Isoelectric Point: 5.92

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097