About Gene List

PF3D7_1204200

Genome location: Pf3D7_12_v3:202,895..204,937(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.06 0.97
Trophozoite expressed 0.27 0.84
Schizont possibly expressed 0.07 0.95
Gametocyte expressed 0.60 0.68

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1204200

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.999 | MFS: -2.551 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I604

"Best" AlphaFill ligand hit: LPA (lipoic acid, Local RMSD=11.48) with 5T8U (Global RMSD=24.40)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532578

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 14 32 19 28
disruptive 57 95 47 106
missense 31 69 34 83

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 21 61 27 50
disruptive 99 172 75 194
missense 50 123 56 121

PlasmoDB Total SNPs: 122

Non-coding: 24 | Synonymous: 50 | Nonsynonymous: 48 | Stop Codon: 0

Protein Information

Protein Length: 629 | Molecular Weight (kDa): 76.203

UniProt ID(s): Q8I604

PDB ID(s): None

Isoelectric Point: 8.6

Protein Domain Annotations:

Source Family ID Description
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
PFam N/A N/A
Superfamily SSF52540 P-loop containing nucleoside triphosphate hydrolase

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097