Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.06 | 0.97 |
Trophozoite | expressed | 0.27 | 0.84 |
Schizont | possibly expressed | 0.07 | 0.95 |
Gametocyte | expressed | 0.60 | 0.68 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1204200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.999 | MFS: -2.551 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I604
"Best" AlphaFill ligand hit: LPA (lipoic acid, Local RMSD=11.48) with 5T8U (Global RMSD=24.40)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 14 | 32 | 19 | 28 |
disruptive | 57 | 95 | 47 | 106 |
missense | 31 | 69 | 34 | 83 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 21 | 61 | 27 | 50 |
disruptive | 99 | 172 | 75 | 194 |
missense | 50 | 123 | 56 | 121 |
PlasmoDB Total SNPs: 122
Non-coding: 24 | Synonymous: 50 | Nonsynonymous: 48 | Stop Codon: 0
Protein Length: 629 | Molecular Weight (kDa): 76.203
UniProt ID(s): Q8I604
PDB ID(s): None
Isoelectric Point: 8.6
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PFam | N/A | N/A |
Superfamily | SSF52540 | P-loop containing nucleoside triphosphate hydrolase |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |