Product Description: 41-3 protein
SignalP Peptide: MLLRHNSFCICIILVLCSVQRCLS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.03 | 0.99 |
Trophozoite | not expressed | 0.04 | 0.98 |
Schizont | not expressed | 0.02 | 0.99 |
Gametocyte | expressed | 1.08 | 0.66 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1207700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.141 | MFS: -2.858 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0606200)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0606200)
Modification: Disrupted | RMgm-2077
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I0V6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 18 | 12 | 22 |
disruptive | 0 | 22 | 15 | 47 |
missense | 0 | 21 | 15 | 41 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 36 | 17 | 27 |
disruptive | 5 | 41 | 29 | 68 |
missense | 4 | 39 | 27 | 52 |
PlasmoDB Total SNPs: 76
Non-coding: 55 | Synonymous: 7 | Nonsynonymous: 13 | Stop Codon: 1
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |