Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.06 | 0.97 |
| Trophozoite | expressed | 0.24 | 0.85 |
| Schizont | not expressed | 0.03 | 0.98 |
| Gametocyte | possibly expressed | 0.27 | 0.84 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1207900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.371 | MFS: -3.489 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A143ZZG4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_107492
Most Similar Human Ortholog: F8VRG6
TM-align score: 0.58 | RMSD: 2.85
Seq Identity: 0.11 | Length: 56 / 394
All Human Orthologs (OrthoMCL):
| Gene ID | Description |
|---|---|
| ENSG00000171310 | carbohydrate sulfotransferase 11 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 14 | 14 | 28 |
| disruptive | 7 | 53 | 33 | 72 |
| missense | 7 | 53 | 33 | 69 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 45 | 16 | 47 |
| disruptive | 12 | 137 | 40 | 107 |
| missense | 10 | 127 | 36 | 81 |
PlasmoDB Total SNPs: 66
Non-coding: 33 | Synonymous: 16 | Nonsynonymous: 17 | Stop Codon: 0
Protein Length: 394 | Molecular Weight (kDa): 47.792
UniProt ID(s): A0A143ZZG4
PDB ID(s): None
Isoelectric Point: 8.42
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |