About Gene List

PF3D7_1208600 (TIM10)

Genome location: Pf3D7_12_v3:401,950..402,905(+)

Genome classification: Core

Function and Localization

Product Description: mitochondrial import inner membrane translocase subunit TIM10, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex
Component GO:0005743 mitochondrial inner membrane
Component GO:0005758 mitochondrial intermembrane space
Component GO:0005739 mitochondrion
Function GO:0015450 protein-transporting ATPase activity
Process GO:0045039 protein insertion into mitochondrial inner membrane
Process GO:0006626 protein targeting to mitochondrion
Process GO:0015031 protein transport

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 0.13 0.93
Trophozoite expressed 0.34 0.80
Schizont expressed 0.03 0.98
Gametocyte expressed 0.28 0.84

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1208600

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS *tentative

MIS: 0.144 | MFS: -2.839 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_0607100)

  • Relative Growth Rate: 0.07 ± 0.04
  • Confidence: 7.82

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I5W2

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

Orthology to BindingDB Entries:

UniProt Protein Name Species Homology Source BindingDB Ligands
P87108 Mitochondrial import inner membrane translocase subunit TIM10 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) HOGENOM, OrthoDB, OrthoMCL MLS000038396MLS000041934MLS000054763MLS000091924...

Orthology Information

Ortholog Group (OrthoMCL): OG6_103064

Most Similar Human Ortholog: P62072

TM-align score: 0.91 | RMSD: 1.41

Seq Identity: 0.36 | Length: 75 / 75

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000134809 translocase of inner mitochondrial membrane 10

Protein Information

Protein Length: 75 | Molecular Weight (kDa): 8.537

UniProt ID(s): Q8I5W2

PDB ID(s): None

Isoelectric Point: 6.43

Protein Domain Annotations:

Source Family ID Description
InterPro IPR004217 Tim10-like
InterPro IPR027100 Mitochondrial import inner membrane translocase subunit Tim10
InterPro IPR035427 Tim10-like domain superfamily
PFam PF02953 Tim10-like
Superfamily SSF144122 Tim10-like domain superfamily

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

No passing variants found

PlasmoDB Total SNPs: 46

Non-coding: 45 | Synonymous: 1 | Nonsynonymous: 0 | Stop Codon: 0

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097
34494883 A Prioritized and Validated Resource of Mitochondrial Proteins in PlasmodiumIdentifies Unique Biology. van Esveld SL, Meerstein-Kessel L, ..., Huynen MA 10.1128/mSphere.00614-21
29925672 Divergent Small Tim Homologues Are Associated with TbTim17 and Critical for theBiogenesis of TbTim17 Protein Complexes in Trypanosoma brucei Smith JT Jr, Singha UK, Misra S, Chaudhuri M 10.1128/mSphere.00204-18
34639127 Cellular and Molecular Targets of Nucleotide-Tagged Trithiolato-Bridged AreneRuthenium Complexes in the Protozoan Parasites Toxoplasma gondii and Trypanosomabrucei Anghel N, Muller J, ..., Hemphill A 10.3390/ijms221910787