About Gene List

PF3D7_1208900 (PPM11)

Genome location: Pf3D7_12_v3:412,795..421,285(+)

Genome classification: Core

Function and Localization

Product Description: protein phosphatase PPM11, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: 3.1.3.16 (Protein-serine/threonine phosphatase)

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005634 nucleus

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 0.28 0.86
Trophozoite expressed 1.07 0.47
Schizont expressed 1.09 0.47
Gametocyte expressed 1.00 0.50

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1208900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -2.475 | #Insertions: 2

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1207900)

  • Relative Growth Rate: 1.02 ± 0.18
  • Confidence: 4.77

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I5V9

"Best" AlphaFill ligand hit: No AlphaFill hits

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
3.1.3.16 protein-serine/threonine phosphatase ATPADPUDPAMPGTPUTPUMPNaFEDTAEGTAcAMPNADPH...

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_100742

Most Similar Human Ortholog: Q8NI37

TM-align score: 0.81 | RMSD: 2.85

Seq Identity: 0.27 | Length: 276 / 1442

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000196850 protein phosphatase targeting COQ7

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 8 84 42 89
disruptive 15 106 71 194
missense 11 93 65 174

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 19 168 56 83
disruptive 37 261 178 357
missense 27 215 144 239

PlasmoDB Total SNPs: 279

Non-coding: 196 | Synonymous: 51 | Nonsynonymous: 32 | Stop Codon: 0

Protein Information

Protein Length: 1442 | Molecular Weight (kDa): 166.864

UniProt ID(s): Q8I5V9

PDB ID(s): None

Isoelectric Point: 6.44

Protein Domain Annotations:

Source Family ID Description
InterPro IPR001932 PPM-type phosphatase domain
InterPro IPR036457 PPM-type phosphatase domain superfamily
InterPro IPR039123 Protein phosphatase 2C
PFam N/A N/A
Superfamily SSF81606 PPM-type phosphatase domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104
23181666 Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. Oehring SC, Woodcroft BJ, ..., Voss TS 10.1186/gb-2012-13-11-r108