About Gene List

PF3D7_1210700

Genome location: Pf3D7_12_v3:476,110..479,111(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: MLNSGGEHVESERRPCLKYLISLLLLLMLMLILR

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.02 0.99
Trophozoite not expressed 0.19 0.87
Schizont not expressed 0.08 0.94
Gametocyte not expressed 0.10 0.94

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1210700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -0.751 | #Insertions: 8

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_0609200)

  • Relative Growth Rate: 0.96 ± 0.07
  • Confidence: 6.82

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_0609200)

Modification: Disrupted | RMgm-2091

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I5U2

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532914

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 26 15 30
disruptive 39 68 38 106
missense 18 55 30 75

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 9 53 20 32
disruptive 58 136 78 174
missense 31 99 57 100

PlasmoDB Total SNPs: 161

Non-coding: 94 | Synonymous: 30 | Nonsynonymous: 37 | Stop Codon: 0

Protein Information

Protein Length: 526 | Molecular Weight (kDa): 62.776

UniProt ID(s): Q8I5U2

PDB ID(s): None

Isoelectric Point: 4.81

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097