Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.03 | 0.99 |
Trophozoite | not expressed | 0.03 | 0.98 |
Schizont | not expressed | 0.02 | 0.98 |
Gametocyte | not expressed | 0.19 | 0.88 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1218700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.301 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1434300)
Modification: Disrupted | RMgm-3912
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I5M1
"Best" AlphaFill ligand hit: ABH (2(s)-amino-6-boronohexanoic acid, Local RMSD=0.57) with 3MMR (Global RMSD=21.46)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 17 | 13 | 41 |
disruptive | 9 | 76 | 48 | 110 |
missense | 9 | 76 | 45 | 99 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 0 | 49 | 17 | 44 |
disruptive | 17 | 189 | 82 | 177 |
missense | 15 | 171 | 74 | 109 |
PlasmoDB Total SNPs: 31
Non-coding: 0 | Synonymous: 19 | Nonsynonymous: 11 | Stop Codon: 1
Protein Length: 496 | Molecular Weight (kDa): 58.798
UniProt ID(s): Q8I5M1
PDB ID(s): None
Isoelectric Point: 6.25
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |