Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | no data | N/A | N/A |
| Ring | no data | 0.00 | 1.00 |
| Trophozoite | no data | 0.00 | 1.00 |
| Schizont | no data | 0.00 | 1.00 |
| Gametocyte | no data | 0.01 | 0.99 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1219800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.169 | MFS: -3.149 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1435000)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1435000)
Modification: Disrupted | RMgm-3916
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6S3K7
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 0 | 1 | 1 | 1 |
| disruptive | 0 | 1 | 1 | 3 |
| missense | 0 | 1 | 1 | 3 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 0 | 2 | 0 | 4 |
| disruptive | 0 | 5 | 0 | 11 |
| missense | 0 | 4 | 0 | 4 |
PlasmoDB Total SNPs: 4
Non-coding: 0 | Synonymous: 4 | Nonsynonymous: 0 | Stop Codon: 0
Protein Length: 53 | Molecular Weight (kDa): 6.272
UniProt ID(s): C6S3K7
PDB ID(s): None
Isoelectric Point: 3.55
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |