About Gene List

PF3D7_1221900

Genome location: Pf3D7_12_v3:871,737..876,247(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium membrane protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 5

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 1.53 0.38
Trophozoite expressed 0.36 0.81
Schizont expressed 0.42 0.75
Gametocyte not expressed 0.25 0.86

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1221900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.23 | MFS: -3.345 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I5J4

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532343

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 13 48 20 47
disruptive 42 155 66 137
missense 30 120 49 108

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 18 84 33 58
disruptive 73 266 109 228
missense 49 198 86 156

PlasmoDB Total SNPs: 211

Non-coding: 101 | Synonymous: 58 | Nonsynonymous: 52 | Stop Codon: 0

Protein Information

Protein Length: 859 | Molecular Weight (kDa): 101.143

UniProt ID(s): Q8I5J4

PDB ID(s): None

Isoelectric Point: 8.7

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097