About Gene List

PF3D7_1226000

Genome location: Pf3D7_12_v3:1,053,194..1,056,616(-)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 0.11 0.94
Trophozoite expressed 0.20 0.88
Schizont expressed 0.03 0.98
Gametocyte expressed 0.33 0.82

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1226000

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.559 | MFS: -3.059 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I5F7

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_153771

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 6 29 29 53
disruptive 14 74 41 124
missense 12 72 40 119

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 9 76 27 67
disruptive 21 168 93 170
missense 16 141 86 143

PlasmoDB Total SNPs: 136

Non-coding: 71 | Synonymous: 39 | Nonsynonymous: 26 | Stop Codon: 0

Protein Information

Protein Length: 908 | Molecular Weight (kDa): 108.486

UniProt ID(s): Q8I5F7

PDB ID(s): None

Isoelectric Point: 9.13

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097