About Gene List

PF3D7_1231500

Genome location: Pf3D7_12_v3:1,298,137..1,300,451(+)

Genome classification: Core

Function and Localization

Product Description: mitosis protein dim1, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: 2.1.1.183 (18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase)

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0046540 U4/U6 x U5 tri-snRNP complex
Component GO:0005682 U5 snRNP
Component GO:0005681 spliceosomal complex
Process GO:0000375 RNA splicing, via transesterification reactions
Process GO:0000245 spliceosomal complex assembly

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 0.03 0.98
Trophozoite expressed 0.03 0.98
Schizont expressed 0.02 0.99
Gametocyte expressed 0.04 0.98

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1231500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS *tentative

MIS: 0.449 | MFS: 0 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I5A5

"Best" AlphaFill ligand hit: No AlphaFill hits

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase No BRENDA inhibitors

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_102797

Most Similar Human Ortholog: P83876

TM-align score: 0.97 | RMSD: 1.23

Seq Identity: 0.77 | Length: 139 / 139

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000141759 thioredoxin like 4A

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

No passing variants found

PlasmoDB Total SNPs: 179

Non-coding: 176 | Synonymous: 3 | Nonsynonymous: 0 | Stop Codon: 0

Protein Information

Protein Length: 139 | Molecular Weight (kDa): 16.539

UniProt ID(s): Q8I5A5

PDB ID(s): None

Isoelectric Point: 4.97

Protein Domain Annotations:

Source Family ID Description
InterPro IPR004123 Dim1 family
InterPro IPR036249 Thioredoxin-like superfamily
PFam PF02966 Dim1 family
Superfamily SSF52833 Thioredoxin-like superfamily

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097