Product Description: WD repeat-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 0.14 | 0.93 |
Trophozoite | expressed | 0.38 | 0.77 |
Schizont | expressed | 0.14 | 0.91 |
Gametocyte | expressed | 0.36 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1231900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.12 | MFS: -2.962 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I5A2
"Best" AlphaFill ligand hit: FAD (flavin-adenine dinucleotide, Local RMSD=0.13) with 3JQQ (Global RMSD=22.01)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 16 | 51 | 22 | 51 |
disruptive | 20 | 112 | 74 | 190 |
missense | 19 | 106 | 74 | 168 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 22 | 94 | 30 | 65 |
disruptive | 61 | 301 | 130 | 331 |
missense | 37 | 249 | 112 | 227 |
PlasmoDB Total SNPs: 162
Non-coding: 113 | Synonymous: 26 | Nonsynonymous: 23 | Stop Codon: 0
Protein Length: 1086 | Molecular Weight (kDa): 130.779
UniProt ID(s): Q8I5A2
PDB ID(s): None
Isoelectric Point: 8.7
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR036322 | WD40-repeat-containing domain superfamily |
PFam | N/A | N/A |
Superfamily | SSF50978 | WD40-repeat-containing domain superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
12368868 | Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14. | Gardner MJ, Shallom SJ, ..., Fraser CM | 10.1038/nature01094 |