About Gene List

PF3D7_1237300

Genome location: Pf3D7_12_v3:1,556,299..1,557,617(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.01 1.00
Trophozoite possibly expressed 0.02 0.99
Schizont not expressed 0.03 0.98
Gametocyte not expressed 0.16 0.90

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1237300

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.999 | MFS: 0.453 | #Insertions: 3

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1451900)

  • Relative Growth Rate: 0.83 ± 0.27
  • Confidence: 4.02

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1451900)

Modification: Disrupted | RMgm-4007

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I550

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533133

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 0 11 9 24
disruptive 3 28 16 48
missense 3 28 16 45

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 0 26 16 25
disruptive 8 74 39 76
missense 7 63 32 52

PlasmoDB Total SNPs: 80

Non-coding: 71 | Synonymous: 5 | Nonsynonymous: 4 | Stop Codon: 0

Protein Information

Protein Length: 307 | Molecular Weight (kDa): 36.284

UniProt ID(s): Q8I550

PDB ID(s): None

Isoelectric Point: 8.07

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily SSF52047 N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097