About Gene List

PF3D7_1238200

Genome location: Pf3D7_12_v3:1,586,261..1,587,466(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring possibly expressed 0.04 0.98
Trophozoite not expressed 0.03 0.98
Schizont possibly expressed 0.02 0.99
Gametocyte expressed 0.71 0.64

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1238200

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.998 | MFS: -0.03 | #Insertions: 2

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I541

"Best" AlphaFill ligand hit: NUP (, Local RMSD=0.61) with 2Q8Z (Global RMSD=20.06)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533074

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 18 6 8
disruptive 9 25 14 52
missense 9 24 14 49

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 11 30 11 18
disruptive 17 66 31 92
missense 14 61 27 67

PlasmoDB Total SNPs: 28

Non-coding: 4 | Synonymous: 13 | Nonsynonymous: 10 | Stop Codon: 1

Protein Information

Protein Length: 349 | Molecular Weight (kDa): 42.072

UniProt ID(s): Q8I541

PDB ID(s): None

Isoelectric Point: 8.75

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily SSF55753 N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097