Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | expressed | N/A | N/A |
Ring | possibly expressed | 0.04 | 0.98 |
Trophozoite | not expressed | 0.03 | 0.98 |
Schizont | possibly expressed | 0.02 | 0.99 |
Gametocyte | expressed | 0.71 | 0.64 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1238200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.998 | MFS: -0.03 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I541
"Best" AlphaFill ligand hit: NUP (, Local RMSD=0.61) with 2Q8Z (Global RMSD=20.06)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 18 | 6 | 8 |
disruptive | 9 | 25 | 14 | 52 |
missense | 9 | 24 | 14 | 49 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 11 | 30 | 11 | 18 |
disruptive | 17 | 66 | 31 | 92 |
missense | 14 | 61 | 27 | 67 |
PlasmoDB Total SNPs: 28
Non-coding: 4 | Synonymous: 13 | Nonsynonymous: 10 | Stop Codon: 1
Protein Length: 349 | Molecular Weight (kDa): 42.072
UniProt ID(s): Q8I541
PDB ID(s): None
Isoelectric Point: 8.75
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | SSF55753 | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |